Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 VENTXP7-201ENST00000475503 772 ntBASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 AC011840.4-201ENST00000578471 627 ntBASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 AL121672.3-201ENST00000608644 468 ntBASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 AL353801.3-201ENST00000609898 542 ntBASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS9D1Q9Y2B5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS9D1Q9Y2B5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS9D1Q9Y2B5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
VPS9D1Q9Y2B5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS9D1Q9Y2B5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS9D1Q9Y2B5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 COX5BP2-201ENST00000392354 334 ntBASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AC246785.2-201ENST00000432512 513 ntBASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AC002558.1-201ENST00000488906 803 ntBASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AC124864.1-201ENST00000623408 392 ntBASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 AC022726.2-201ENST00000634673 547 ntBASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS9D1Q9Y2B5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 BX276092.5-203ENST00000456199 560 ntBASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 AL023806.1-201ENST00000603994 1649 ntBASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS9D1Q9Y2B5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms