Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 AC138028.4-201ENST00000564984 1845 ntBASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 LINC01126-201ENST00000623515 1646 ntBASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA1Q9UND3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 AC009533.2-201ENST00000543664 586 ntBASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 BX640515.1-201ENST00000617215 977 ntBASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA1Q9UND3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 OR6D1P-203ENST00000641209 4860 ntBASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 KRT18P67-201ENST00000432816 1264 ntBASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 CROCCP1-201ENST00000426910 5675 ntBASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA1Q9UND3 FLJ13224-201ENST00000313737 1514 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms