Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGC3Q9UN70 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 AC016396.2-201ENST00000562575 1417 ntBASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 STK25P1-201ENST00000585406 838 ntBASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 AC099336.1-202ENST00000602961 463 ntBASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGC3Q9UN70 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 CROCCP2-202ENST00000412962 2773 ntBASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 AL023806.1-201ENST00000603994 1649 ntBASIC18.6■□□□□ 0.57
PCDHGC3Q9UN70 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms