Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 AP000347.1-202ENST00000435868 847 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 AC093909.1-201ENST00000504731 1122 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 IGHV3-52-201ENST00000519770 353 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 AC148477.5-201ENST00000625164 1645 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTN3Q9P232 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 AC004817.3-201ENST00000602957 2129 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 REXO1L11P-201ENST00000620964 1927 ntBASIC18.98■□□□□ 0.63
CNTN3Q9P232 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTN3Q9P232 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 AL590627.1-203ENST00000421194 1026 ntBASIC18.97■□□□□ 0.63
CNTN3Q9P232 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 AC139887.3-201ENST00000568585 713 ntBASIC18.97■□□□□ 0.63
CNTN3Q9P232 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 IL9RP2-201ENST00000423948 1312 ntBASIC18.97■□□□□ 0.63
CNTN3Q9P232 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.97■□□□□ 0.63
CNTN3Q9P232 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTN3Q9P232 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 MYCLP1-201ENST00000372451 1075 ntBASIC18.96■□□□□ 0.63
CNTN3Q9P232 AL022342.1-201ENST00000400363 863 ntBASIC18.96■□□□□ 0.63
CNTN3Q9P232 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 LAGE3P1-201ENST00000425356 484 ntBASIC18.96■□□□□ 0.63
CNTN3Q9P232 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 AC120114.3-201ENST00000611923 658 ntBASIC18.96■□□□□ 0.63
CNTN3Q9P232 AC006116.8-202ENST00000587620 1550 ntBASIC18.96■□□□□ 0.63
CNTN3Q9P232 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CNTN3Q9P232 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTN3Q9P232 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNTN3Q9P232 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTN3Q9P232 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTN3Q9P232 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTN3Q9P232 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTN3Q9P232 AC012640.2-201ENST00000561606 901 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms