Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.09■□□□□ 0.17
EMC3Q9P0I2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EMC3Q9P0I2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EMC3Q9P0I2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 AC093010.1-201ENST00000473625 1624 ntBASIC16.08■□□□□ 0.17
EMC3Q9P0I2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 AL391005.1-201ENST00000623953 2435 ntBASIC16.08■□□□□ 0.17
EMC3Q9P0I2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
EMC3Q9P0I2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 VENTXP7-201ENST00000475503 772 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 IGHV3-41-201ENST00000613121 348 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 AC093458.2-201ENST00000623150 629 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 PCDHA12-202ENST00000613593 2588 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EMC3Q9P0I2 AC093677.2-201ENST00000600169 1863 ntBASIC16.08■□□□□ 0.16
EMC3Q9P0I2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 AC022898.2-201ENST00000616822 1312 ntBASIC16.07■□□□□ 0.16
EMC3Q9P0I2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 AC084018.2-201ENST00000613093 2607 ntBASIC16.07■□□□□ 0.16
EMC3Q9P0I2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EMC3Q9P0I2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 LINC00167-201ENST00000530583 1419 ntBASIC16.06■□□□□ 0.16
EMC3Q9P0I2 AC016734.2-201ENST00000624325 1377 ntBASIC16.06■□□□□ 0.16
EMC3Q9P0I2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EMC3Q9P0I2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms