Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 AC108860.2-201ENST00000562760 2183 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 AP000347.1-202ENST00000435868 847 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 AC079781.3-201ENST00000449110 356 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 AC091304.2-201ENST00000564639 760 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 PCDH8P1-201ENST00000428983 2773 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 AC022211.2-201ENST00000585075 2527 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 AIRN-201ENST00000601203 4374 ntBASIC18.6■□□□□ 0.57
CD248Q9HCU0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD248Q9HCU0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.6■□□□□ 0.57
CD248Q9HCU0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 AP005901.3-202ENST00000581653 237 ntBASIC18.59■□□□□ 0.57
CD248Q9HCU0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.59■□□□□ 0.57
CD248Q9HCU0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 AL592071.1-201ENST00000611956 408 ntBASIC18.59■□□□□ 0.57
CD248Q9HCU0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD248Q9HCU0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CD248Q9HCU0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.58■□□□□ 0.57
CD248Q9HCU0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CD248Q9HCU0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.58■□□□□ 0.57
CD248Q9HCU0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD248Q9HCU0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.58■□□□□ 0.57
CD248Q9HCU0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CD248Q9HCU0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD248Q9HCU0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD248Q9HCU0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.58■□□□□ 0.56
CD248Q9HCU0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.58■□□□□ 0.56
CD248Q9HCU0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.58■□□□□ 0.56
CD248Q9HCU0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 IGHV3-41-201ENST00000613121 348 ntBASIC18.58■□□□□ 0.56
CD248Q9HCU0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CD248Q9HCU0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms