Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 MIR3917-201ENST00000580971 93 ntBASIC19.73■□□□□ 0.75
CBX8Q9HC52 AC233702.5-201ENST00000584107 538 ntBASIC19.73■□□□□ 0.75
CBX8Q9HC52 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CBX8Q9HC52 AL603756.1-201ENST00000606511 2163 ntBASIC19.73■□□□□ 0.75
CBX8Q9HC52 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CBX8Q9HC52 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AC012618.2-201ENST00000428058 849 ntBASIC19.72■□□□□ 0.75
CBX8Q9HC52 RBM17P1-201ENST00000453646 1190 ntBASIC19.72■□□□□ 0.75
CBX8Q9HC52 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AC113404.2-201ENST00000507884 177 ntBASIC19.72■□□□□ 0.75
CBX8Q9HC52 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 AC116562.4-202ENST00000641738 218 ntBASIC19.72■□□□□ 0.75
CBX8Q9HC52 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.72■□□□□ 0.75
CBX8Q9HC52 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBX8Q9HC52 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 LINC01311-201ENST00000565162 1445 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 AC005104.2-201ENST00000427818 678 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 PVRIG2P-201ENST00000435460 978 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 KRT18P65-201ENST00000439811 1286 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 AP003071.4-201ENST00000562276 1284 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.71■□□□□ 0.75
CBX8Q9HC52 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBX8Q9HC52 RNF216P1-203ENST00000404404 2427 ntBASIC19.71■□□□□ 0.75
CBX8Q9HC52 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 SLC25A1P3-201ENST00000395415 828 ntBASIC19.7■□□□□ 0.74
CBX8Q9HC52 AL390955.1-201ENST00000428694 934 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms