Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC018695.7-201ENST00000624587 2492 ntBASIC16.91■□□□□ 0.3
PIF1Q9H611 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.91■□□□□ 0.3
PIF1Q9H611 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.91■□□□□ 0.3
PIF1Q9H611 AL355075.4-201ENST00000554988 638 ntBASIC16.91■□□□□ 0.3
PIF1Q9H611 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.91■□□□□ 0.3
PIF1Q9H611 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.91■□□□□ 0.3
PIF1Q9H611 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.91■□□□□ 0.3
PIF1Q9H611 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.91■□□□□ 0.3
PIF1Q9H611 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PIF1Q9H611 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PIF1Q9H611 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PIF1Q9H611 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.91■□□□□ 0.3
PIF1Q9H611 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PIF1Q9H611 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PIF1Q9H611 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.9■□□□□ 0.3
PIF1Q9H611 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.9■□□□□ 0.3
PIF1Q9H611 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PIF1Q9H611 AL390955.1-201ENST00000428694 934 ntBASIC16.9■□□□□ 0.3
PIF1Q9H611 SLC25A1P2-201ENST00000430693 912 ntBASIC16.9■□□□□ 0.3
PIF1Q9H611 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.9■□□□□ 0.3
PIF1Q9H611 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PIF1Q9H611 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 AC009949.1-201ENST00000623048 1830 ntBASIC16.9■□□□□ 0.3
PIF1Q9H611 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PIF1Q9H611 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
PIF1Q9H611 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PIF1Q9H611 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PIF1Q9H611 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PIF1Q9H611 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PIF1Q9H611 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.3
PIF1Q9H611 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PIF1Q9H611 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 AC106886.4-201ENST00000623557 2502 ntBASIC16.89■□□□□ 0.29
PIF1Q9H611 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.89■□□□□ 0.29
PIF1Q9H611 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 BX088651.1-201ENST00000540551 451 ntBASIC16.89■□□□□ 0.29
PIF1Q9H611 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.89■□□□□ 0.29
PIF1Q9H611 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.89■□□□□ 0.29
PIF1Q9H611 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.89■□□□□ 0.29
PIF1Q9H611 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PIF1Q9H611 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PIF1Q9H611 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIF1Q9H611 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.89■□□□□ 0.29
PIF1Q9H611 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 AC092338.2-201ENST00000568827 1415 ntBASIC16.88■□□□□ 0.29
PIF1Q9H611 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms