Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 TERF1P1-201ENST00000311003 1181 ntBASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 AC117947.1-201ENST00000427448 529 ntBASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 AC066615.1-201ENST00000640911 628 ntBASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TUBB1Q9H4B7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 AC090340.1-201ENST00000620778 4980 ntBASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 AC113347.1-201ENST00000413321 391 ntBASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 AC096633.1-201ENST00000422446 749 ntBASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TUBB1Q9H4B7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 HBZP1-201ENST00000354915 429 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 BX664615.1-201ENST00000443558 458 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 GPR32P1-201ENST00000601788 811 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 AL139327.4-201ENST00000612362 153 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 HYMAI.1-201ENST00000620949 238 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 AC097493.4-201ENST00000641197 219 ntBASIC17■□□□□ 0.31
TUBB1Q9H4B7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TUBB1Q9H4B7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17■□□□□ 0.31
TUBB1Q9H4B7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms