Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM4Q9C037 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM4Q9C037 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM4Q9C037 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRIM4Q9C037 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.42
TRIM4Q9C037 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM4Q9C037 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 AL499627.1-201ENST00000569373 2188 ntBASIC17.7■□□□□ 0.42
TRIM4Q9C037 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 AC004951.3-201ENST00000418645 1148 ntBASIC17.7■□□□□ 0.42
TRIM4Q9C037 SLC25A1P2-201ENST00000430693 912 ntBASIC17.7■□□□□ 0.42
TRIM4Q9C037 AC112907.2-201ENST00000448639 330 ntBASIC17.7■□□□□ 0.42
TRIM4Q9C037 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRIM4Q9C037 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM4Q9C037 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.69■□□□□ 0.42
TRIM4Q9C037 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC009078.2-202ENST00000463353 338 ntBASIC17.69■□□□□ 0.42
TRIM4Q9C037 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 UNC93B7-201ENST00000509439 705 ntBASIC17.69■□□□□ 0.42
TRIM4Q9C037 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 CKBP1-201ENST00000565489 1086 ntBASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC083849.1-201ENST00000615227 514 ntBASIC17.69■□□□□ 0.42
TRIM4Q9C037 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM4Q9C037 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM4Q9C037 AC103702.1-201ENST00000548801 2630 ntBASIC17.68■□□□□ 0.42
TRIM4Q9C037 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM4Q9C037 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 KRT17P6-201ENST00000453795 1220 ntBASIC17.68■□□□□ 0.42
TRIM4Q9C037 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM4Q9C037 ZNF444P1-201ENST00000559497 298 ntBASIC17.68■□□□□ 0.42
TRIM4Q9C037 AC092338.2-201ENST00000568827 1415 ntBASIC17.68■□□□□ 0.42
TRIM4Q9C037 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms