Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 AC092364.2-202ENST00000597012 1073 ntBASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 SPCS2P1-201ENST00000561636 679 ntBASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 REXO1L3P-201ENST00000622202 1288 ntBASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
PCDH11XQ9BZA7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 ADH5P3-201ENST00000433842 1137 ntBASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 AC022145.2-201ENST00000598203 171 ntBASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 REXO1L9P-201ENST00000604264 2108 ntBASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 ACTL9-202ENST00000612068 1252 ntBASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH11XQ9BZA7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AP000997.3-201ENST00000623333 2250 ntBASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC092919.2-201ENST00000623631 1645 ntBASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 FAM185BP-201ENST00000443595 716 ntBASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 AC006116.8-202ENST00000587620 1550 ntBASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH11XQ9BZA7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH11XQ9BZA7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.7■■□□□ 1.23
PCDH11XQ9BZA7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH11XQ9BZA7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
PCDH11XQ9BZA7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.7■■□□□ 1.23
PCDH11XQ9BZA7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms