Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC005237.2-201ENST00000434368 219 ntBASIC20.09■□□□□ 0.81
PTPN18Q99952 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN18Q99952 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.09■□□□□ 0.81
PTPN18Q99952 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.09■□□□□ 0.81
PTPN18Q99952 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN18Q99952 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN18Q99952 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN18Q99952 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PTPN18Q99952 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.08■□□□□ 0.81
PTPN18Q99952 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 AC002056.1-201ENST00000395613 760 ntBASIC20.08■□□□□ 0.81
PTPN18Q99952 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PTPN18Q99952 TFAMP1-201ENST00000412727 736 ntBASIC20.08■□□□□ 0.81
PTPN18Q99952 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN18Q99952 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.08■□□□□ 0.81
PTPN18Q99952 AC069335.1-201ENST00000489972 472 ntBASIC20.08■□□□□ 0.81
PTPN18Q99952 TERF1P3-201ENST00000505638 1227 ntBASIC20.08■□□□□ 0.81
PTPN18Q99952 AL512356.2-201ENST00000546955 174 ntBASIC20.08■□□□□ 0.81
PTPN18Q99952 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.08■□□□□ 0.81
PTPN18Q99952 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN18Q99952 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN18Q99952 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN18Q99952 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.08■□□□□ 0.8
PTPN18Q99952 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN18Q99952 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN18Q99952 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPN18Q99952 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 MIR943-201ENST00000401286 94 ntBASIC20.07■□□□□ 0.8
PTPN18Q99952 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN18Q99952 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 BASP1P1-201ENST00000430708 665 ntBASIC20.07■□□□□ 0.8
PTPN18Q99952 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN18Q99952 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN18Q99952 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN18Q99952 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.07■□□□□ 0.8
PTPN18Q99952 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PTPN18Q99952 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN18Q99952 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTPN18Q99952 BX276092.7-203ENST00000637198 1536 ntBASIC20.07■□□□□ 0.8
PTPN18Q99952 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN18Q99952 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN18Q99952 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN18Q99952 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTPN18Q99952 GPS2P2-201ENST00000430745 888 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 AL592309.1-201ENST00000443127 649 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 CNN2P2-201ENST00000443536 909 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PTPN18Q99952 CNN2P3-201ENST00000450201 906 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN18Q99952 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPN18Q99952 AL136317.3-201ENST00000618497 906 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN18Q99952 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN18Q99952 AL031598.1-201ENST00000561511 1773 ntBASIC20.06■□□□□ 0.8
PTPN18Q99952 TUBB3P1-201ENST00000405796 1332 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms