Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.62□□□□□ -0.07
S1PR3Q99500 HLA-F-220ENST00000434407 884 ntBASIC14.62□□□□□ -0.07
S1PR3Q99500 KRT18P38-201ENST00000449496 1282 ntBASIC14.62□□□□□ -0.07
S1PR3Q99500 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
S1PR3Q99500 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.62□□□□□ -0.07
S1PR3Q99500 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.62□□□□□ -0.07
S1PR3Q99500 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.62□□□□□ -0.07
S1PR3Q99500 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.62□□□□□ -0.07
S1PR3Q99500 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.62□□□□□ -0.07
S1PR3Q99500 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.62□□□□□ -0.07
S1PR3Q99500 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
S1PR3Q99500 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.62□□□□□ -0.07
S1PR3Q99500 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
S1PR3Q99500 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
S1PR3Q99500 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 SIRPAP1-201ENST00000448467 1770 ntBASIC14.61□□□□□ -0.07
S1PR3Q99500 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 TSPY12P-201ENST00000421279 868 ntBASIC14.61□□□□□ -0.07
S1PR3Q99500 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 AC112907.2-201ENST00000448639 330 ntBASIC14.61□□□□□ -0.07
S1PR3Q99500 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 AC009154.2-201ENST00000621177 724 ntBASIC14.61□□□□□ -0.07
S1PR3Q99500 AC079602.3-201ENST00000623931 403 ntBASIC14.61□□□□□ -0.07
S1PR3Q99500 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.61□□□□□ -0.07
S1PR3Q99500 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.61□□□□□ -0.07
S1PR3Q99500 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
S1PR3Q99500 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
S1PR3Q99500 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 AC100803.2-201ENST00000562459 1963 ntBASIC14.6□□□□□ -0.07
S1PR3Q99500 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.6□□□□□ -0.07
S1PR3Q99500 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.6□□□□□ -0.07
S1PR3Q99500 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
S1PR3Q99500 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.6□□□□□ -0.07
S1PR3Q99500 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.6□□□□□ -0.07
S1PR3Q99500 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms