Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 TSPY22P-201ENST00000427496 604 ntBASIC16.77■□□□□ 0.28
BBS4Q96RK4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.77■□□□□ 0.28
BBS4Q96RK4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BBS4Q96RK4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
BBS4Q96RK4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 AC133963.1-201ENST00000504166 1679 ntBASIC16.76■□□□□ 0.27
BBS4Q96RK4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 AL136038.3-201ENST00000561909 1096 ntBASIC16.76■□□□□ 0.27
BBS4Q96RK4 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 NTF6B-201ENST00000591913 560 ntBASIC16.76■□□□□ 0.27
BBS4Q96RK4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BBS4Q96RK4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.76■□□□□ 0.27
BBS4Q96RK4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 AC020916.1-201ENST00000587762 1774 ntBASIC16.75■□□□□ 0.27
BBS4Q96RK4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 AC011498.5-201ENST00000592027 486 ntBASIC16.75■□□□□ 0.27
BBS4Q96RK4 AL121956.5-201ENST00000625261 221 ntBASIC16.75■□□□□ 0.27
BBS4Q96RK4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
BBS4Q96RK4 BX276092.7-203ENST00000637198 1536 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms