Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 AL365203.3-201ENST00000609742 2057 ntBASIC16.65■□□□□ 0.26
NR1H4Q96RI1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 AL390719.1-204ENST00000412397 1219 ntBASIC16.65■□□□□ 0.26
NR1H4Q96RI1 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H4Q96RI1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H4Q96RI1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.64■□□□□ 0.26
NR1H4Q96RI1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H4Q96RI1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H4Q96RI1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 GPAT2P1-201ENST00000444924 1672 ntBASIC16.64■□□□□ 0.25
NR1H4Q96RI1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 AL662844.4-201ENST00000606367 2838 ntBASIC16.64■□□□□ 0.25
NR1H4Q96RI1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H4Q96RI1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 AC126177.1-201ENST00000547829 2218 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms