Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 MIR4525-201ENST00000580000 75 ntBASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 IGHV3-71-201ENST00000523324 359 ntBASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 AL662799.1-202ENST00000614205 422 ntBASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 REXO1L3P-201ENST00000622202 1288 ntBASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD1Q96PZ7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 NCF1C-201ENST00000438382 1427 ntBASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 RN7SL692P-201ENST00000464677 288 ntBASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 AC099522.2-201ENST00000607001 744 ntBASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD1Q96PZ7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC067863.1-201ENST00000494933 530 ntBASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC068137.2-201ENST00000605408 478 ntBASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms