Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 AL020989.1-201ENST00000422979 469 ntBASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 MTDHP5-201ENST00000598980 586 ntBASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNGAP1Q96PV0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 AC004706.3-202ENST00000621574 984 ntBASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 AC135050.7-201ENST00000624508 2218 ntBASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNGAP1Q96PV0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SYNGAP1Q96PV0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 AC023274.1-201ENST00000418278 595 ntBASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 AC134684.3-201ENST00000641758 218 ntBASIC20.01■□□□□ 0.79
SYNGAP1Q96PV0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 AC020763.4-201ENST00000623414 4170 ntBASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 AC007613.1-201ENST00000572811 2597 ntBASIC20■□□□□ 0.79
SYNGAP1Q96PV0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms