Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRP3Q96P20 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRP3Q96P20 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRP3Q96P20 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 AL020996.1-203ENST00000536896 2307 ntBASIC21.71■■□□□ 1.07
NLRP3Q96P20 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 KRT19P2-202ENST00000557173 1012 ntBASIC21.71■■□□□ 1.07
NLRP3Q96P20 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NLRP3Q96P20 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.71■■□□□ 1.07
NLRP3Q96P20 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.7■■□□□ 1.07
NLRP3Q96P20 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 REXO1L9P-201ENST00000604264 2108 ntBASIC21.7■■□□□ 1.06
NLRP3Q96P20 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRP3Q96P20 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.7■■□□□ 1.06
NLRP3Q96P20 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 AL031432.2-201ENST00000566714 459 ntBASIC21.69■■□□□ 1.06
NLRP3Q96P20 AL928711.1-201ENST00000570165 459 ntBASIC21.69■■□□□ 1.06
NLRP3Q96P20 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 AP000997.3-201ENST00000623333 2250 ntBASIC21.69■■□□□ 1.06
NLRP3Q96P20 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NLRP3Q96P20 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRP3Q96P20 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 LINC02084-201ENST00000606069 1096 ntBASIC21.68■■□□□ 1.06
NLRP3Q96P20 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 AC007064.4-201ENST00000637740 555 ntBASIC21.68■■□□□ 1.06
NLRP3Q96P20 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 AC025580.3-201ENST00000617932 1424 ntBASIC21.68■■□□□ 1.06
NLRP3Q96P20 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 PI4KAP1-204ENST00000612579 1703 ntBASIC21.68■■□□□ 1.06
NLRP3Q96P20 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms