Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 SLC25A6P2-201ENST00000497974 877 ntBASIC19.07■□□□□ 0.64
ALPK3Q96L96 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 AC007952.6-201ENST00000573168 2673 ntBASIC19.07■□□□□ 0.64
ALPK3Q96L96 AC003957.1-201ENST00000625108 2673 ntBASIC19.07■□□□□ 0.64
ALPK3Q96L96 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 ARSEP1-201ENST00000420443 635 ntBASIC19.06■□□□□ 0.64
ALPK3Q96L96 ACA64.2-201ENST00000459014 129 ntBASIC19.06■□□□□ 0.64
ALPK3Q96L96 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 AC100757.3-201ENST00000622361 1406 ntBASIC19.06■□□□□ 0.64
ALPK3Q96L96 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ALPK3Q96L96 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.06■□□□□ 0.64
ALPK3Q96L96 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 PIN1P1-201ENST00000412108 996 ntBASIC19.05■□□□□ 0.64
ALPK3Q96L96 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 FAM86C2P-203ENST00000528684 1004 ntBASIC19.05■□□□□ 0.64
ALPK3Q96L96 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.05■□□□□ 0.64
ALPK3Q96L96 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALPK3Q96L96 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.04■□□□□ 0.64
ALPK3Q96L96 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 PI4KAP1-204ENST00000612579 1703 ntBASIC19.04■□□□□ 0.64
ALPK3Q96L96 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.04■□□□□ 0.64
ALPK3Q96L96 SPDYE7P-202ENST00000420373 878 ntBASIC19.04■□□□□ 0.64
ALPK3Q96L96 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALPK3Q96L96 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms