Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 LINC01451-201ENST00000623792 534 ntBASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 AC005915.1-201ENST00000624912 2018 ntBASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP6Q96FZ7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 MST1L-201ENST00000442552 2185 ntBASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 AC091390.4-202ENST00000476426 537 ntBASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 CKBP1-201ENST00000565489 1086 ntBASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 AC131212.4-201ENST00000623606 975 ntBASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP6Q96FZ7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 AC008622.2-201ENST00000617006 1229 ntBASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 AL445675.2-201ENST00000620291 557 ntBASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 LINC00554-201ENST00000564841 3011 ntBASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms