Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 AC018695.7-201ENST00000624587 2492 ntBASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 AC106886.4-201ENST00000623557 2502 ntBASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 INGX-201ENST00000359239 846 ntBASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 AC116407.2-201ENST00000613639 860 ntBASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 UBALD1-205ENST00000590891 2641 ntBASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC47A1Q96FL8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 HMGA1P5-201ENST00000412453 271 ntBASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC47A1Q96FL8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 REXO1L11P-201ENST00000620964 1927 ntBASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 FER1L4-210ENST00000615531 5998 ntBASIC16.66■□□□□ 0.26
SLC47A1Q96FL8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms