Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTP4Q96DX8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 AC012313.1-201ENST00000593393 3059 ntBASIC18■□□□□ 0.47
RTP4Q96DX8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 KRT126P-201ENST00000549467 1181 ntBASIC17.99■□□□□ 0.47
RTP4Q96DX8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 AL138831.2-201ENST00000606564 490 ntBASIC17.99■□□□□ 0.47
RTP4Q96DX8 AC069148.1-201ENST00000608741 768 ntBASIC17.99■□□□□ 0.47
RTP4Q96DX8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.99■□□□□ 0.47
RTP4Q96DX8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTP4Q96DX8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 SLC25A1P3-201ENST00000395415 828 ntBASIC17.98■□□□□ 0.47
RTP4Q96DX8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 TSPY22P-201ENST00000427496 604 ntBASIC17.98■□□□□ 0.47
RTP4Q96DX8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 AL592071.1-201ENST00000611956 408 ntBASIC17.98■□□□□ 0.47
RTP4Q96DX8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTP4Q96DX8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RTP4Q96DX8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 MYCLP1-201ENST00000372451 1075 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 HCG4P8-203ENST00000443049 980 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 AC122714.2-201ENST00000502787 707 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 AC005336.2-201ENST00000593183 939 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms