Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2AF1L4Q8WU68 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 AL022326.1-202ENST00000641533 845 ntBASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2AF1L4Q8WU68 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 AC009102.3-201ENST00000623118 1491 ntBASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2AF1L4Q8WU68 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 MKNK2P1-201ENST00000437526 628 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 BCRP1-201ENST00000444246 691 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AC136632.2-201ENST00000512891 861 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AC135050.7-201ENST00000624508 2218 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2AF1L4Q8WU68 ELL2P1-201ENST00000413990 1906 ntBASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2AF1L4Q8WU68 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms