Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC009949.1-201ENST00000623048 1830 ntBASIC21.32■■□□□ 1
SNED1Q8TER0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.32■■□□□ 1
SNED1Q8TER0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.31■■□□□ 1
SNED1Q8TER0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.31■■□□□ 1
SNED1Q8TER0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.31■■□□□ 1
SNED1Q8TER0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.31■■□□□ 1
SNED1Q8TER0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.31■■□□□ 1
SNED1Q8TER0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.31■■□□□ 1
SNED1Q8TER0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.31■■□□□ 1
SNED1Q8TER0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.31■■□□□ 1
SNED1Q8TER0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.31■■□□□ 1
SNED1Q8TER0 LINC00628-201ENST00000628516 1289 ntBASIC21.31■■□□□ 1
SNED1Q8TER0 BX276092.7-203ENST00000637198 1536 ntBASIC21.31■■□□□ 1
SNED1Q8TER0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.31■■□□□ 1
SNED1Q8TER0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.31■■□□□ 1
SNED1Q8TER0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.31■■□□□ 1
SNED1Q8TER0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNED1Q8TER0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SNED1Q8TER0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SNED1Q8TER0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.3■■□□□ 1
SNED1Q8TER0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.3■■□□□ 1
SNED1Q8TER0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.3■■□□□ 1
SNED1Q8TER0 AC138761.1-201ENST00000584393 385 ntBASIC21.3■■□□□ 1
SNED1Q8TER0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 Z92544.3-201ENST00000624747 417 ntBASIC21.3■■□□□ 1
SNED1Q8TER0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
SNED1Q8TER0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.3■■□□□ 1
SNED1Q8TER0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNED1Q8TER0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.3■■□□□ 1
SNED1Q8TER0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 AL355306.1-201ENST00000415580 579 ntBASIC21.29■■□□□ 1
SNED1Q8TER0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 FAM185BP-201ENST00000443595 716 ntBASIC21.29■■□□□ 1
SNED1Q8TER0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SNED1Q8TER0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.29■■□□□ 1
SNED1Q8TER0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNED1Q8TER0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.29■■□□□ 1
SNED1Q8TER0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.29■■□□□ 1
SNED1Q8TER0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.29■■□□□ 1
SNED1Q8TER0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.29■■□□□ 1
SNED1Q8TER0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.29■■□□□ 1
SNED1Q8TER0 AJ011932.1-201ENST00000621707 465 ntBASIC21.29■■□□□ 1
SNED1Q8TER0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.28■■□□□ 1
SNED1Q8TER0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.28■■□□□ 1
SNED1Q8TER0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.28■■□□□ 1
SNED1Q8TER0 MIR661-201ENST00000384842 89 ntBASIC21.28■■□□□ 1
SNED1Q8TER0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms