Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 AC005104.2-201ENST00000427818 678 ntBASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 KRT18P3-201ENST00000451602 1288 ntBASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 AC108751.1-201ENST00000490852 363 ntBASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 AL354751.1-201ENST00000412768 1863 ntBASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF3Q8TEJ3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AC097637.2-201ENST00000624096 1997 ntBASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AL591424.1-201ENST00000442569 1213 ntBASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 AC139530.3-201ENST00000620344 690 ntBASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF3Q8TEJ3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 BX842568.4-201ENST00000421222 227 ntBASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SH3RF3Q8TEJ3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms