Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AP002414.3-201ENST00000589352 1468 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 RNA5SP415-201ENST00000517246 115 ntBASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3RF2Q8TEC5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 PMS2P7-201ENST00000506558 1336 ntBASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 SIGLEC16-201ENST00000599858 1437 ntBASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3RF2Q8TEC5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 KRT18P13-201ENST00000400056 1290 ntBASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AC116407.2-201ENST00000613639 860 ntBASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 AL049757.1-201ENST00000616842 1596 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms