Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.9■□□□□ 0.62
LMO3Q8TAP4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.89■□□□□ 0.62
LMO3Q8TAP4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LMO3Q8TAP4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LMO3Q8TAP4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 STK25P1-201ENST00000585406 838 ntBASIC18.89■□□□□ 0.61
LMO3Q8TAP4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO3Q8TAP4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AC012313.1-201ENST00000593393 3059 ntBASIC18.88■□□□□ 0.61
LMO3Q8TAP4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 MYCLP1-201ENST00000372451 1075 ntBASIC18.88■□□□□ 0.61
LMO3Q8TAP4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AC074051.2-201ENST00000565115 352 ntBASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AC092329.2-201ENST00000598402 547 ntBASIC18.88■□□□□ 0.61
LMO3Q8TAP4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 AC132938.5-201ENST00000624980 1813 ntBASIC18.88■□□□□ 0.61
LMO3Q8TAP4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
LMO3Q8TAP4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 IGHV3-52-201ENST00000519770 353 ntBASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AP000867.3-201ENST00000524675 377 ntBASIC18.87■□□□□ 0.61
LMO3Q8TAP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AC012615.1-201ENST00000565797 1299 ntBASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms