Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC098818.2-201ENST00000564925 2320 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 AL032819.2-201ENST00000624543 2162 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 FAM58CP-201ENST00000435741 640 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 AC190387.1-201ENST00000551683 408 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 AC096734.2-201ENST00000562054 433 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 AL513210.1-201ENST00000629608 234 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 TNXA-203ENST00000507684 2038 ntBASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNIP1Q8TAD8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 KRT19P2-202ENST00000557173 1012 ntBASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 AC025678.2-201ENST00000562061 970 ntBASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 MIR4745-201ENST00000577608 62 ntBASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 AC004877.2-201ENST00000623941 599 ntBASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNIP1Q8TAD8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms