Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC005336.2-201ENST00000593183 939 ntBASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC114341.1-201ENST00000618070 349 ntBASIC15.05■□□□□ -0
CLDND2Q8NHS1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 AC009154.2-201ENST00000621177 724 ntBASIC15.05■□□□□ -0
CLDND2Q8NHS1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDND2Q8NHS1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CLDND2Q8NHS1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 AC134043.2-201ENST00000624206 2238 ntBASIC15.04■□□□□ -0
CLDND2Q8NHS1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 MIR5100-201ENST00000579544 119 ntBASIC15.04■□□□□ -0
CLDND2Q8NHS1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.04■□□□□ -0
CLDND2Q8NHS1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CLDND2Q8NHS1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDND2Q8NHS1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms