Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 AC144831.1-201ENST00000573312 2656 ntBASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 MIR4449-201ENST00000578365 66 ntBASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 RARRES2P11-201ENST00000635158 484 ntBASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 AL512353.2-201ENST00000448759 1962 ntBASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HES6-206ENST00000409574 738 ntTSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 AK3-203ENST00000447596 705 ntTSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 KRT8P17-201ENST00000453110 1448 ntBASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 PCDHA14-201ENST00000506751 2298 ntBASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms