Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RARRES2P6-201ENST00000567333 442 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CYP2T1P-202ENST00000641596 2535 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC022188.1-201ENST00000620960 1664 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC116353.5-201ENST00000638148 1699 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC092068.3-201ENST00000587894 2016 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC004951.3-201ENST00000418645 1148 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC026271.2-201ENST00000428091 497 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 GPAT2P1-201ENST00000444924 1672 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC132938.6-201ENST00000623828 1655 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AL513523.2-202ENST00000427283 2040 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC036111.1-201ENST00000533973 1582 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AL024508.2-201ENST00000607749 1894 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.22□□□□□ -0.29
NUP35Q8NFH5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 UNC93B4-201ENST00000505679 747 ntBASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms