Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RARRES2P6-201ENST00000567333 442 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CYP2T1P-202ENST00000641596 2535 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC022188.1-201ENST00000620960 1664 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC116353.5-201ENST00000638148 1699 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC092068.3-201ENST00000587894 2016 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC004951.3-201ENST00000418645 1148 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC026271.2-201ENST00000428091 497 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 GPAT2P1-201ENST00000444924 1672 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC132938.6-201ENST00000623828 1655 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AL513523.2-202ENST00000427283 2040 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC036111.1-201ENST00000533973 1582 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 AL024508.2-201ENST00000607749 1894 ntBASIC13.23□□□□□ -0.29
NUP35Q8NFH5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP35Q8NFH5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.22□□□□□ -0.29
NUP35Q8NFH5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 UNC93B4-201ENST00000505679 747 ntBASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NUP35Q8NFH5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms