Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC097374.2-201ENST00000618617 1306 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC096633.1-201ENST00000422446 749 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC246785.2-201ENST00000432512 513 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 DDX43P3-201ENST00000441064 443 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AC125634.1-201ENST00000438758 1403 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 AL355312.1-201ENST00000407115 2176 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.48■□□□□ 0.07
CPEB3Q8NE35 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPEB3Q8NE35 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 LINC00265-3P-201ENST00000447588 903 ntBASIC15.47■□□□□ 0.07
CPEB3Q8NE35 TOB2P1-201ENST00000469761 992 ntBASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AC010460.3-201ENST00000511359 1579 ntBASIC15.47■□□□□ 0.07
CPEB3Q8NE35 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AL138831.2-201ENST00000606564 490 ntBASIC15.47■□□□□ 0.07
CPEB3Q8NE35 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPEB3Q8NE35 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPEB3Q8NE35 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms