Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 KRT89P-201ENST00000620027 1478 ntBASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC33Q8N5R6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 SAPCD2P3-201ENST00000455031 850 ntBASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 AF238378.1-201ENST00000526806 358 ntBASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC33Q8N5R6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 HLA-A-201ENST00000376802 1334 ntBASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 TSPY12P-201ENST00000421279 868 ntBASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC33Q8N5R6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 AC120114.3-201ENST00000611923 658 ntBASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms