Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC25A1P3-201ENST00000395415 828 ntBASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AC027796.2-201ENST00000575326 344 ntBASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARHGEF28Q8N1W1 AC004408.2-201ENST00000623613 2777 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 DDT-204ENST00000404092 805 ntTSL 3 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AL031432.2-201ENST00000566714 459 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AL928711.1-201ENST00000570165 459 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 ACTL9-202ENST00000612068 1252 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 ABALON-201ENST00000629058 1903 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 CD82-202ENST00000342935 967 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AL355385.1-201ENST00000606123 409 ntBASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.24■■□□□ 1.47
ARHGEF28Q8N1W1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARHGEF28Q8N1W1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 BCAR1-209ENST00000546196 1340 ntBASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 AC096734.2-201ENST00000562054 433 ntBASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 AL596442.2-201ENST00000610240 980 ntBASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 AC092902.6-201ENST00000641783 218 ntBASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
ARHGEF28Q8N1W1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms