Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 AL121956.5-201ENST00000625261 221 ntBASIC21.83■■□□□ 1.09
SMC5Q8IY18 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.83■■□□□ 1.08
SMC5Q8IY18 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC5Q8IY18 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC5Q8IY18 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMC5Q8IY18 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMC5Q8IY18 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.83■■□□□ 1.08
SMC5Q8IY18 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.83■■□□□ 1.08
SMC5Q8IY18 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC5Q8IY18 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.83■■□□□ 1.08
SMC5Q8IY18 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.82■■□□□ 1.08
SMC5Q8IY18 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC5Q8IY18 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 AC005332.1-201ENST00000577698 1310 ntBASIC21.81■■□□□ 1.08
SMC5Q8IY18 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 FAM86EP-206ENST00000510506 987 ntBASIC21.81■■□□□ 1.08
SMC5Q8IY18 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 AC109462.3-201ENST00000573934 613 ntBASIC21.81■■□□□ 1.08
SMC5Q8IY18 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMC5Q8IY18 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC5Q8IY18 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AC046185.3-201ENST00000623228 1824 ntBASIC21.8■■□□□ 1.08
SMC5Q8IY18 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AC246785.2-201ENST00000432512 513 ntBASIC21.8■■□□□ 1.08
SMC5Q8IY18 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 AP005901.3-202ENST00000581653 237 ntBASIC21.8■■□□□ 1.08
SMC5Q8IY18 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 IGHV3-41-201ENST00000613121 348 ntBASIC21.8■■□□□ 1.08
SMC5Q8IY18 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SMC5Q8IY18 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC5Q8IY18 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMC5Q8IY18 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.79■■□□□ 1.08
SMC5Q8IY18 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms