Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AD000864.1-201ENST00000624076 2295 ntBASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 AC092647.4-201ENST00000457211 535 ntBASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 LINC01023-201ENST00000606054 436 ntBASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 Z83836.1-201ENST00000624605 1642 ntBASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 BX276092.7-203ENST00000637198 1536 ntBASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC83Q8IWF9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.77■□□□□ 0.91
CCDC83Q8IWF9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 LYSMD4-203ENST00000378904 2122 ntBASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 AC083849.1-201ENST00000615227 514 ntBASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC83Q8IWF9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC83Q8IWF9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC83Q8IWF9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms