Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 AC124067.4-201ENST00000519691 2379 ntBASIC16.9■□□□□ 0.3
RAB43Q86YS6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB43Q86YS6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB43Q86YS6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB43Q86YS6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 AC068472.1-201ENST00000474589 881 ntBASIC16.89■□□□□ 0.29
RAB43Q86YS6 AC009533.2-201ENST00000543664 586 ntBASIC16.89■□□□□ 0.29
RAB43Q86YS6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB43Q86YS6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB43Q86YS6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 AF238378.1-201ENST00000526806 358 ntBASIC16.88■□□□□ 0.29
RAB43Q86YS6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 AC141586.5-201ENST00000624546 2050 ntBASIC16.88■□□□□ 0.29
RAB43Q86YS6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB43Q86YS6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB43Q86YS6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.87■□□□□ 0.29
RAB43Q86YS6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB43Q86YS6 MRPL3P1-201ENST00000400109 1033 ntBASIC16.87■□□□□ 0.29
RAB43Q86YS6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 MTCL1P1-201ENST00000446207 792 ntBASIC16.87■□□□□ 0.29
RAB43Q86YS6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB43Q86YS6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms