Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22■■□□□ 1.11
COL23A1Q86Y22 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.99■■□□□ 1.11
COL23A1Q86Y22 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.99■■□□□ 1.11
COL23A1Q86Y22 AC125807.1-201ENST00000483097 614 ntBASIC21.99■■□□□ 1.11
COL23A1Q86Y22 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 IGHV3-52-201ENST00000519770 353 ntBASIC21.99■■□□□ 1.11
COL23A1Q86Y22 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 AL390754.1-201ENST00000619088 582 ntBASIC21.99■■□□□ 1.11
COL23A1Q86Y22 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL23A1Q86Y22 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.98■■□□□ 1.11
COL23A1Q86Y22 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 RBPMS2P1-201ENST00000437762 623 ntBASIC21.98■■□□□ 1.11
COL23A1Q86Y22 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 CRB3P1-201ENST00000449338 276 ntBASIC21.98■■□□□ 1.11
COL23A1Q86Y22 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 AC140878.1-201ENST00000565277 250 ntBASIC21.98■■□□□ 1.11
COL23A1Q86Y22 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL23A1Q86Y22 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 AC008677.1-201ENST00000519230 1561 ntBASIC21.97■■□□□ 1.11
COL23A1Q86Y22 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 AC140658.5-201ENST00000438532 169 ntBASIC21.97■■□□□ 1.11
COL23A1Q86Y22 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL23A1Q86Y22 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 SLC25A6P2-201ENST00000497974 877 ntBASIC21.96■■□□□ 1.11
COL23A1Q86Y22 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 CR383656.12-201ENST00000549567 513 ntBASIC21.96■■□□□ 1.11
COL23A1Q86Y22 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL23A1Q86Y22 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms