Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM4Q86VH4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
LRRTM4Q86VH4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 FGFR3P6-201ENST00000457012 610 ntBASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 AC109462.3-201ENST00000573934 613 ntBASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 AC019129.2-201ENST00000609837 1235 ntBASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM4Q86VH4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AL049757.1-201ENST00000616842 1596 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AL353593.2-201ENST00000602529 1483 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AC002558.1-201ENST00000488906 803 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 IGHV3-52-201ENST00000519770 353 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AL160237.2-201ENST00000556165 472 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 AC104692.2-201ENST00000603054 253 ntBASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRTM4Q86VH4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms