Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AC113347.1-201ENST00000413321 391 ntBASIC18.05■□□□□ 0.48
CASC4Q6P4E1 SPDYE15P-201ENST00000424157 909 ntBASIC18.05■□□□□ 0.48
CASC4Q6P4E1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AC139887.4-201ENST00000607877 719 ntBASIC18.05■□□□□ 0.48
CASC4Q6P4E1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AC011558.1-201ENST00000623459 338 ntBASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 AC004263.2-201ENST00000617183 678 ntBASIC18.04■□□□□ 0.48
CASC4Q6P4E1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CASC4Q6P4E1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 AC080080.1-201ENST00000625121 2420 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 LINC00304-203ENST00000565008 1864 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 TSPY12P-201ENST00000421279 868 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 BX664615.1-201ENST00000443558 458 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 YBX1P2-201ENST00000489612 999 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 AC073912.3-201ENST00000624414 853 ntBASIC18.03■□□□□ 0.48
CASC4Q6P4E1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CASC4Q6P4E1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 HLA-J-201ENST00000462773 1622 ntBASIC18.02■□□□□ 0.48
CASC4Q6P4E1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms