Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
SNAPC4Q5SXM2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 AL358472.5-202ENST00000641448 1267 ntBASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC28.57■■■□□ 2.16
SNAPC4Q5SXM2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC28.56■■■□□ 2.16
SNAPC4Q5SXM2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 NME2P1-201ENST00000426182 414 ntBASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 AC004890.2-204ENST00000481968 304 ntBASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC28.55■■■□□ 2.16
SNAPC4Q5SXM2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 AL662799.1-202ENST00000614205 422 ntBASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 AC116562.4-201ENST00000641316 2276 ntBASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 AKAP8P1-201ENST00000434743 1349 ntBASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC28.54■■■□□ 2.16
SNAPC4Q5SXM2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 IGHV3-52-201ENST00000519770 353 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 AC069120.2-201ENST00000524091 540 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 BX276092.7-203ENST00000637198 1536 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 CALY-202ENST00000368555 783 ntTSL 2 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 U91328.1-201ENST00000437528 223 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 AC002558.1-201ENST00000488906 803 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 AC097493.3-201ENST00000509725 367 ntBASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC28.53■■■□□ 2.16
SNAPC4Q5SXM2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms