Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 AC011467.2-201ENST00000598425 242 ntBASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 AL390961.4-201ENST00000623958 2535 ntBASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 RNPS1P1-201ENST00000507437 918 ntBASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 PHGDH-209ENST00000641074 1780 ntBASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAP47Q5SQN1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FGFR3P6-201ENST00000457012 610 ntBASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 AC093909.1-201ENST00000504731 1122 ntBASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 IL9RP2-201ENST00000423948 1312 ntBASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNAP47Q5SQN1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms