Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ALFQ53S48 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.17■□□□□ 0.5
ALFQ53S48 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.17■□□□□ 0.5
ALFQ53S48 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.17■□□□□ 0.5
ALFQ53S48 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.17■□□□□ 0.5
ALFQ53S48 REXO1L6P-202ENST00000619970 1078 ntBASIC18.17■□□□□ 0.5
ALFQ53S48 AL691432.3-201ENST00000621860 400 ntBASIC18.17■□□□□ 0.5
ALFQ53S48 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.17■□□□□ 0.5
ALFQ53S48 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
ALFQ53S48 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ALFQ53S48 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.17■□□□□ 0.5
ALFQ53S48 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.17■□□□□ 0.5
ALFQ53S48 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALFQ53S48 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.16■□□□□ 0.5
ALFQ53S48 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.16■□□□□ 0.5
ALFQ53S48 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ALFQ53S48 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.16■□□□□ 0.5
ALFQ53S48 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.16■□□□□ 0.5
ALFQ53S48 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ALFQ53S48 AF238378.1-201ENST00000526806 358 ntBASIC18.16■□□□□ 0.5
ALFQ53S48 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.16■□□□□ 0.5
ALFQ53S48 LINC01711-201ENST00000598340 967 ntBASIC18.16■□□□□ 0.5
ALFQ53S48 AC019129.2-201ENST00000609837 1235 ntBASIC18.16■□□□□ 0.5
ALFQ53S48 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 AC134043.2-201ENST00000624206 2238 ntBASIC18.16■□□□□ 0.5
ALFQ53S48 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.16■□□□□ 0.5
ALFQ53S48 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ALFQ53S48 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALFQ53S48 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ALFQ53S48 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.16■□□□□ 0.5
ALFQ53S48 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
ALFQ53S48 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.15■□□□□ 0.5
ALFQ53S48 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.15■□□□□ 0.5
ALFQ53S48 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 AL049757.1-201ENST00000616842 1596 ntBASIC18.15■□□□□ 0.5
ALFQ53S48 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.15■□□□□ 0.5
ALFQ53S48 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALFQ53S48 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ALFQ53S48 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALFQ53S48 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
ALFQ53S48 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALFQ53S48 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms