Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DSC1Q08554 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DSC1Q08554 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
DSC1Q08554 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DSC1Q08554 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 IGLL3P-201ENST00000412472 434 ntBASIC18.69■□□□□ 0.58
DSC1Q08554 ACTG1P4-201ENST00000425123 1122 ntBASIC18.69■□□□□ 0.58
DSC1Q08554 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.69■□□□□ 0.58
DSC1Q08554 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.69■□□□□ 0.58
DSC1Q08554 MIR3687-2-201ENST00000577708 61 ntBASIC18.69■□□□□ 0.58
DSC1Q08554 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 MIR3687-1-201ENST00000614492 61 ntBASIC18.69■□□□□ 0.58
DSC1Q08554 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 BICD1-207ENST00000551848 1962 ntBASIC18.69■□□□□ 0.58
DSC1Q08554 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DSC1Q08554 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DSC1Q08554 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.68■□□□□ 0.58
DSC1Q08554 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.68■□□□□ 0.58
DSC1Q08554 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.68■□□□□ 0.58
DSC1Q08554 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 AC010654.1-201ENST00000615722 808 ntBASIC18.68■□□□□ 0.58
DSC1Q08554 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 ABALON-201ENST00000629058 1903 ntBASIC18.68■□□□□ 0.58
DSC1Q08554 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DSC1Q08554 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
DSC1Q08554 AC002310.6-201ENST00000624451 1377 ntBASIC18.68■□□□□ 0.58
DSC1Q08554 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.67■□□□□ 0.58
DSC1Q08554 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
DSC1Q08554 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
DSC1Q08554 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
DSC1Q08554 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 OR7E47P-204ENST00000575924 449 ntBASIC18.67■□□□□ 0.58
DSC1Q08554 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.67■□□□□ 0.58
DSC1Q08554 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.67■□□□□ 0.58
DSC1Q08554 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.67■□□□□ 0.58
DSC1Q08554 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
DSC1Q08554 AC092865.6-201ENST00000642101 219 ntBASIC18.67■□□□□ 0.58
DSC1Q08554 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DSC1Q08554 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DSC1Q08554 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
DSC1Q08554 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
DSC1Q08554 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DSC1Q08554 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DSC1Q08554 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 MRPL20P1-201ENST00000400819 433 ntBASIC18.66■□□□□ 0.58
DSC1Q08554 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DSC1Q08554 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.66■□□□□ 0.58
DSC1Q08554 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
DSC1Q08554 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms