Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 AC104076.2-201ENST00000448912 469 ntBASIC17.05■□□□□ 0.32
HMGCS1Q01581 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGCS1Q01581 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCS1Q01581 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 AC005332.3-201ENST00000589904 676 ntBASIC17.04■□□□□ 0.32
HMGCS1Q01581 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 GPR32P1-201ENST00000601788 811 ntBASIC17.04■□□□□ 0.32
HMGCS1Q01581 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGCS1Q01581 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 LINC01311-201ENST00000565162 1445 ntBASIC17.04■□□□□ 0.32
HMGCS1Q01581 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCS1Q01581 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 MTCL1P1-201ENST00000446207 792 ntBASIC17.03■□□□□ 0.32
HMGCS1Q01581 AC092647.4-201ENST00000457211 535 ntBASIC17.03■□□□□ 0.32
HMGCS1Q01581 AC068472.1-201ENST00000474589 881 ntBASIC17.03■□□□□ 0.32
HMGCS1Q01581 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 RNF126P1-202ENST00000569893 925 ntBASIC17.03■□□□□ 0.32
HMGCS1Q01581 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCS1Q01581 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCS1Q01581 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms