Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.59■□□□□ 0.09
NKX6-1P78426 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.59■□□□□ 0.09
NKX6-1P78426 AC011840.4-201ENST00000578471 627 ntBASIC15.59■□□□□ 0.09
NKX6-1P78426 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.59■□□□□ 0.09
NKX6-1P78426 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.59■□□□□ 0.09
NKX6-1P78426 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.59■□□□□ 0.09
NKX6-1P78426 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX6-1P78426 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NKX6-1P78426 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.59■□□□□ 0.09
NKX6-1P78426 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX6-1P78426 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX6-1P78426 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX6-1P78426 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX6-1P78426 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
NKX6-1P78426 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NKX6-1P78426 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
NKX6-1P78426 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NKX6-1P78426 POM121L3P-201ENST00000419331 1163 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 RNPS1P1-201ENST00000507437 918 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 RNA5SP419-201ENST00000515908 135 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.58■□□□□ 0.08
NKX6-1P78426 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 TERC-201ENST00000602385 541 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
NKX6-1P78426 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NKX6-1P78426 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
NKX6-1P78426 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 LINC00602-201ENST00000629776 2065 ntBASIC15.58■□□□□ 0.08
NKX6-1P78426 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NKX6-1P78426 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NKX6-1P78426 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 FAM220CP-201ENST00000395253 831 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 KRT18P67-201ENST00000432816 1264 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 AC092183.1-201ENST00000469884 875 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 POLD2P1-201ENST00000511220 997 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 AC009154.2-201ENST00000621177 724 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 PMS2P7-201ENST00000506558 1336 ntBASIC15.57■□□□□ 0.08
NKX6-1P78426 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
NKX6-1P78426 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NKX6-1P78426 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NKX6-1P78426 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NKX6-1P78426 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.56■□□□□ 0.08
NKX6-1P78426 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.56■□□□□ 0.08
NKX6-1P78426 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 MIR940-201ENST00000401276 94 ntBASIC15.56■□□□□ 0.08
NKX6-1P78426 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NKX6-1P78426 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms