Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.23■□□□□ 0.35
YBX1P67809 AC012313.10-201ENST00000623509 926 ntBASIC17.23■□□□□ 0.35
YBX1P67809 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.23■□□□□ 0.35
YBX1P67809 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.23■□□□□ 0.35
YBX1P67809 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
YBX1P67809 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.23■□□□□ 0.35
YBX1P67809 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.23■□□□□ 0.35
YBX1P67809 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YBX1P67809 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.22■□□□□ 0.35
YBX1P67809 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.22■□□□□ 0.35
YBX1P67809 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
YBX1P67809 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
YBX1P67809 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 NKILA-202ENST00000614771 2598 ntBASIC17.22■□□□□ 0.35
YBX1P67809 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.22■□□□□ 0.35
YBX1P67809 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.22■□□□□ 0.35
YBX1P67809 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.22■□□□□ 0.35
YBX1P67809 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
YBX1P67809 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
YBX1P67809 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.22■□□□□ 0.35
YBX1P67809 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YBX1P67809 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
YBX1P67809 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
YBX1P67809 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
YBX1P67809 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
YBX1P67809 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
YBX1P67809 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.21■□□□□ 0.35
YBX1P67809 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
YBX1P67809 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 IGHV3-47-201ENST00000425060 335 ntBASIC17.21■□□□□ 0.35
YBX1P67809 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.21■□□□□ 0.35
YBX1P67809 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.21■□□□□ 0.35
YBX1P67809 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.21■□□□□ 0.35
YBX1P67809 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.21■□□□□ 0.35
YBX1P67809 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YBX1P67809 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
YBX1P67809 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
YBX1P67809 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
YBX1P67809 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
YBX1P67809 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
YBX1P67809 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.2■□□□□ 0.34
YBX1P67809 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
YBX1P67809 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YBX1P67809 KRT17P6-201ENST00000453795 1220 ntBASIC17.2■□□□□ 0.34
YBX1P67809 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.2■□□□□ 0.34
YBX1P67809 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.2■□□□□ 0.34
YBX1P67809 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.2■□□□□ 0.34
YBX1P67809 AC074051.2-201ENST00000565115 352 ntBASIC17.2■□□□□ 0.34
YBX1P67809 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms