Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CLEC4GP1-201ENST00000596555 870 ntBASIC15.3■□□□□ 0.04
UBA52P62987 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
UBA52P62987 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
UBA52P62987 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.3■□□□□ 0.04
UBA52P62987 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBA52P62987 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA52P62987 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 AC093677.2-201ENST00000600169 1863 ntBASIC15.29■□□□□ 0.04
UBA52P62987 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 LINC01126-201ENST00000623515 1646 ntBASIC15.29■□□□□ 0.04
UBA52P62987 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA52P62987 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
UBA52P62987 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA52P62987 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBA52P62987 AC026396.1-201ENST00000419388 421 ntBASIC15.29■□□□□ 0.04
UBA52P62987 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA52P62987 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 ZNF444P1-201ENST00000559497 298 ntBASIC15.29■□□□□ 0.04
UBA52P62987 NEK4P2-201ENST00000580004 1012 ntBASIC15.29■□□□□ 0.04
UBA52P62987 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA52P62987 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBA52P62987 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA52P62987 AC104417.2-201ENST00000562989 1793 ntBASIC15.29■□□□□ 0.04
UBA52P62987 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA52P62987 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
UBA52P62987 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 FLJ13224-201ENST00000313737 1514 ntBASIC15.28■□□□□ 0.04
UBA52P62987 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
UBA52P62987 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBA52P62987 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.28■□□□□ 0.04
UBA52P62987 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.28■□□□□ 0.04
UBA52P62987 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA52P62987 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA52P62987 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 AC083849.1-201ENST00000615227 514 ntBASIC15.28■□□□□ 0.04
UBA52P62987 AL691432.3-201ENST00000621860 400 ntBASIC15.28■□□□□ 0.04
UBA52P62987 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.28■□□□□ 0.04
UBA52P62987 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.28■□□□□ 0.04
UBA52P62987 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms