Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
USP46P62068 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 AL356309.3-201ENST00000624132 1934 ntBASIC18.57■□□□□ 0.56
USP46P62068 ABALON-201ENST00000629058 1903 ntBASIC18.57■□□□□ 0.56
USP46P62068 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.57■□□□□ 0.56
USP46P62068 PMPCAP1-201ENST00000508114 1576 ntBASIC18.57■□□□□ 0.56
USP46P62068 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.57■□□□□ 0.56
USP46P62068 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.57■□□□□ 0.56
USP46P62068 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.57■□□□□ 0.56
USP46P62068 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.57■□□□□ 0.56
USP46P62068 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 SCARNA2-201ENST00000458748 420 ntBASIC18.57■□□□□ 0.56
USP46P62068 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.57■□□□□ 0.56
USP46P62068 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 AP001005.1-201ENST00000571755 1248 ntBASIC18.57■□□□□ 0.56
USP46P62068 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP46P62068 NKAPP1-205ENST00000585790 367 ntBASIC18.57■□□□□ 0.56
USP46P62068 AC064862.7-201ENST00000604520 867 ntBASIC18.57■□□□□ 0.56
USP46P62068 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.57■□□□□ 0.56
USP46P62068 AC135050.7-201ENST00000624508 2218 ntBASIC18.57■□□□□ 0.56
USP46P62068 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP46P62068 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
USP46P62068 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 FLJ13224-201ENST00000313737 1514 ntBASIC18.56■□□□□ 0.56
USP46P62068 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 AC073648.2-201ENST00000510116 352 ntBASIC18.56■□□□□ 0.56
USP46P62068 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.56■□□□□ 0.56
USP46P62068 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.56■□□□□ 0.56
USP46P62068 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 MIR7706-201ENST00000613747 67 ntBASIC18.56■□□□□ 0.56
USP46P62068 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USP46P62068 AC138028.4-201ENST00000564984 1845 ntBASIC18.56■□□□□ 0.56
USP46P62068 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP46P62068 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
USP46P62068 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP46P62068 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
USP46P62068 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.55■□□□□ 0.56
USP46P62068 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms