Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.52■□□□□ 0.07
SEC61A1P61619 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SEC61A1P61619 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.52■□□□□ 0.07
SEC61A1P61619 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SEC61A1P61619 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SEC61A1P61619 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SEC61A1P61619 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SEC61A1P61619 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SEC61A1P61619 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SEC61A1P61619 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC61A1P61619 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.51■□□□□ 0.07
SEC61A1P61619 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.51■□□□□ 0.07
SEC61A1P61619 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SEC61A1P61619 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
SEC61A1P61619 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.51■□□□□ 0.07
SEC61A1P61619 AP001094.4-201ENST00000579008 2176 ntBASIC15.51■□□□□ 0.07
SEC61A1P61619 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 AC093677.2-201ENST00000600169 1863 ntBASIC15.5■□□□□ 0.07
SEC61A1P61619 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 STARP1-201ENST00000397973 869 ntBASIC15.5■□□□□ 0.07
SEC61A1P61619 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 AC083849.1-201ENST00000615227 514 ntBASIC15.5■□□□□ 0.07
SEC61A1P61619 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SEC61A1P61619 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SEC61A1P61619 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 AL121761.2-201ENST00000598007 1648 ntBASIC15.5■□□□□ 0.07
SEC61A1P61619 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SEC61A1P61619 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SEC61A1P61619 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SEC61A1P61619 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
SEC61A1P61619 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.49■□□□□ 0.07
SEC61A1P61619 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SEC61A1P61619 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms